{"slug":"bio-read-qc-umi-processing","source_name":"bio-read-qc-umi-processing","name":"Bio Read Qc Umi Processing","description":"Extract, process, and deduplicate reads using Unique Molecular Identifiers (UMIs) with umi_tools. Use when library prep includes UMIs and accurate molecule counting is needed, such as in single-cell RNA-seq, low-input RNA-seq, or targeted sequencing to distinguish PCR from biological duplicates.","version":1,"lift":{"pass_rate_delta_pts":36.36,"pass_rate_pct":59.1,"total_cases":22,"passed_cases":13,"tokens_delta_pct":103.9,"turns_delta_pct":0,"verdict":"mixed","benchmark_model":"gemini-3.6-flash","grading_method":"judged","completed_at":"2026-07-24T15:50:28.621846+00:00"},"skill_score":0.5909,"benchmark_models":[{"model":"gemini-3.6-flash","headline":true,"delta_pts":36.36,"with_pass_pct":59.1,"without_pass_pct":22.7,"tokens_delta_pct":103.9,"turns_delta_pct":0,"total_cases":22,"cases_aggregated":21,"verdict":"mixed","never_hurt":true,"completed_at":"2026-07-24T15:50:28.621846+00:00","run_id":"9cc268be-7f4e-44f8-bddb-ace49a2a2a60","version_number":1,"is_latest_version":true,"gate":null}],"trust":{"skill_safety":"passed","safety_status":"clean","intent_verdict":null,"content_status":"clean","indexable":true},"license":null,"install_count":0,"manifest_hash":"cbf40592e99a08232c4619cd67beebb2830ea8cbabc30a6975b5762494a28328","raw_url":"https://app.decimal.ai/s/bio-read-qc-umi-processing/SKILL.md","scorecard_url":"https://app.decimal.ai/skills/bio-read-qc-umi-processing"}