{"slug":"bio-spatial-transcriptomics-image-analysis","source_name":"bio-spatial-transcriptomics-image-analysis","name":"Bio Spatial Transcriptomics Image Analysis","description":"Process and analyze tissue images from spatial transcriptomics data using Squidpy. Extract image features, segment cells/nuclei, and compute morphological features from H&E or IF images. Use when processing tissue images for spatial transcriptomics.","version":1,"lift":{"pass_rate_delta_pts":21.74,"pass_rate_pct":26.1,"total_cases":23,"passed_cases":6,"tokens_delta_pct":75.9,"turns_delta_pct":0,"verdict":"mixed","benchmark_model":"gemini-3.6-flash","grading_method":"judged","completed_at":"2026-07-26T10:00:54.105860+00:00"},"skill_score":0.2609,"benchmark_models":[{"model":"gemini-3.6-flash","headline":true,"delta_pts":21.74,"with_pass_pct":26.1,"without_pass_pct":4.3,"tokens_delta_pct":75.9,"turns_delta_pct":0,"total_cases":23,"cases_aggregated":23,"verdict":"mixed","never_hurt":true,"completed_at":"2026-07-26T10:00:54.105860+00:00","run_id":"56698f9e-035f-4f7c-964a-ed82e05d6d3e","version_number":1,"is_latest_version":true,"gate":null}],"trust":{"skill_safety":"passed","safety_status":"clean","intent_verdict":null,"content_status":"clean","indexable":true},"license":null,"install_count":0,"manifest_hash":"1d6843da27e5d4f9e4d0015eac30df114793b68078880a2cc57c31174636feb5","raw_url":"https://app.decimal.ai/s/bio-spatial-transcriptomics-image-analysis/SKILL.md","scorecard_url":"https://app.decimal.ai/skills/bio-spatial-transcriptomics-image-analysis"}