{"slug":"bio-splicing-pipeline","source_name":"bio-splicing-pipeline","name":"Bio Splicing Pipeline","description":"End-to-end alternative splicing analysis from FASTQ to differential splicing results. Aligns with STAR 2-pass mode, performs junction QC, runs rMATS-turbo for differential analysis, and generates sashimi visualizations. Use when performing comprehensive splicing analysis from raw RNA-seq data.","version":2,"lift":{"pass_rate_delta_pts":8.33,"pass_rate_pct":87.5,"total_cases":24,"passed_cases":21,"tokens_delta_pct":101.2,"turns_delta_pct":0,"verdict":"mixed","benchmark_model":"gemini-3.6-flash","grading_method":"judged","completed_at":"2026-08-02T17:02:46.834172+00:00"},"skill_score":0.875,"benchmark_models":[{"model":"gemini-3.6-flash","headline":true,"delta_pts":8.33,"with_pass_pct":87.5,"without_pass_pct":79.2,"tokens_delta_pct":101.2,"turns_delta_pct":0,"total_cases":24,"cases_aggregated":24,"verdict":"mixed","never_hurt":true,"completed_at":"2026-08-02T17:02:46.834172+00:00","run_id":"5c351871-c148-4b2a-be99-def09dc7c6cd","version_number":2,"is_latest_version":true,"gate":null}],"trust":{"skill_safety":"passed","safety_status":"clean","intent_verdict":"safe","content_status":"clean","indexable":true},"license":null,"install_count":0,"manifest_hash":"fa6a76e3f875f11b09c63e91eba4bbf121371ff4d80c2b2f48a619000432027e","raw_url":"https://app.decimal.ai/s/bio-splicing-pipeline/SKILL.md","scorecard_url":"https://app.decimal.ai/skills/bio-splicing-pipeline"}