{"slug":"jaechang-hits-biopython-sequence-analysis","source_name":"jaechang-hits/biopython-sequence-analysis","name":"Jaechang Hits/Biopython Sequence Analysis","description":"Biopython sequence analysis: parse FASTA/FASTQ/GenBank/GFF (SeqIO), NCBI Entrez (esearch/efetch/elink), remote/local BLAST, pairwise/MSA alignment (PairwiseAligner, MUSCLE/ClustalW), phylogenetic trees (Phylo). Use for gene family studies, phylogenomics, comparative genomics, NCBI pipelines. For PCR/restriction/cloning use biopython-molecular-biology; for SAM/BAM use pysam.","version":1,"lift":{"pass_rate_delta_pts":4.17,"pass_rate_pct":100,"total_cases":24,"passed_cases":24,"tokens_delta_pct":640.9,"turns_delta_pct":0,"verdict":"pass","benchmark_model":"gemini-3.6-flash","grading_method":"judged","completed_at":"2026-08-23T22:58:50.757688+00:00"},"skill_score":1,"benchmark_models":[{"model":"gemini-3.6-flash","headline":true,"delta_pts":4.17,"with_pass_pct":100,"without_pass_pct":95.8,"tokens_delta_pct":640.9,"turns_delta_pct":0,"total_cases":24,"cases_aggregated":24,"verdict":"pass","never_hurt":true,"completed_at":"2026-08-23T22:58:50.757688+00:00","run_id":"573c01d9-09c4-42eb-8ba6-28a80d38e324","version_number":1,"is_latest_version":true,"gate":null}],"trust":{"skill_safety":"passed","safety_status":"clean","intent_verdict":"safe","content_status":"clean","indexable":true},"license":"Biopython License (BSD-like)","install_count":0,"manifest_hash":"28fe5044b65ec712d85e0c4e8ea3db354d4845561be8300179e396455d9c94f7","raw_url":"https://app.decimal.ai/s/jaechang-hits-biopython-sequence-analysis/SKILL.md","scorecard_url":"https://app.decimal.ai/skills/jaechang-hits-biopython-sequence-analysis"}