{"slug":"jaechang-hits-encode-database","source_name":"jaechang-hits/encode-database","name":"Jaechang Hits/Encode Database","description":"ENCODE Portal REST API for regulatory genomics: TF ChIP-seq, ATAC-seq/DNase-seq peaks, histone marks, and RNA-seq across 1000+ cell types. Search experiments by assay/biosample/target; download BED/bigWig; retrieve SCREEN cCREs by region or gene. Use to annotate variants with regulatory tracks, find open chromatin in a cell type, or fetch peak files for ChIP/ATAC analysis. For regulatory variant scoring use regulomedb-database; for GWAS associations use gwas-database.","version":1,"lift":{"pass_rate_delta_pts":13.64,"pass_rate_pct":95.5,"total_cases":22,"passed_cases":21,"tokens_delta_pct":432.7,"turns_delta_pct":0,"verdict":"mixed","benchmark_model":"gemini-3.6-flash","grading_method":"judged","completed_at":"2026-08-24T11:38:49.115873+00:00"},"skill_score":0.9545,"benchmark_models":[{"model":"gemini-3.6-flash","headline":true,"delta_pts":13.64,"with_pass_pct":95.5,"without_pass_pct":81.8,"tokens_delta_pct":432.7,"turns_delta_pct":0,"total_cases":22,"cases_aggregated":22,"verdict":"mixed","never_hurt":true,"completed_at":"2026-08-24T11:38:49.115873+00:00","run_id":"728c95b2-884f-46cc-abc3-642fc1b96122","version_number":1,"is_latest_version":true,"gate":null}],"trust":{"skill_safety":"passed","safety_status":"clean","intent_verdict":"safe","content_status":"clean","indexable":true},"license":"CC-BY-4.0","install_count":0,"manifest_hash":"df89a181655b6305bb85c7e67ce33450b576a52686209fcce0daa0f83c82c9d9","raw_url":"https://app.decimal.ai/s/jaechang-hits-encode-database/SKILL.md","scorecard_url":"https://app.decimal.ai/skills/jaechang-hits-encode-database"}