{"slug":"k-dense-ai-arboreto","source_name":"k-dense-ai/arboreto","name":"K Dense AI/Arboreto","description":"Infer gene regulatory networks (GRNs) from gene expression data using scalable algorithms (GRNBoost2, GENIE3). Use when analyzing transcriptomics data (bulk RNA-seq, single-cell RNA-seq) to identify transcription factor-target gene relationships and regulatory interactions. Supports distributed computation for large-scale datasets.","version":1,"lift":{"pass_rate_delta_pts":18.18,"pass_rate_pct":90.9,"total_cases":22,"passed_cases":20,"tokens_delta_pct":80.9,"turns_delta_pct":0,"verdict":"mixed","benchmark_model":"gemini-3.6-flash","grading_method":"judged","completed_at":"2026-08-09T03:31:12.213757+00:00"},"skill_score":null,"benchmark_models":[{"model":"gemini-3.6-flash","headline":true,"delta_pts":18.18,"with_pass_pct":90.9,"without_pass_pct":72.7,"tokens_delta_pct":80.9,"turns_delta_pct":0,"total_cases":22,"cases_aggregated":22,"verdict":"mixed","never_hurt":true,"completed_at":"2026-08-09T03:31:12.213757+00:00","run_id":"7a51f781-9971-4662-8e93-45579fbcf4ff","version_number":1,"is_latest_version":true,"gate":null}],"trust":{"skill_safety":"passed","safety_status":"clean","intent_verdict":"safe","content_status":"clean","indexable":true},"license":"BSD-3-Clause license","install_count":0,"manifest_hash":"6f7fe2ea2605616fac0add37716282eb2c8a8fd31c4cdfb39b419ef05d7b2802","raw_url":"https://app.decimal.ai/s/k-dense-ai-arboreto/SKILL.md","scorecard_url":"https://app.decimal.ai/skills/k-dense-ai-arboreto"}