{"slug":"k-dense-ai-pacsomatic","source_name":"k-dense-ai/pacsomatic","name":"K Dense AI/Pacsomatic","description":"Operator toolkit for nf-core/pacsomatic matched tumor-normal workflows from BAM inputs. Use this skill when the user needs to validate run inputs, generate pacsomatic-compliant samplesheets, prepare reproducible Nextflow launch artifacts, run locally or submit to schedulers (LSF/Slurm/PBS/SGE), and triage execution failures. Triggers on requests to run pacsomatic, prepare launch commands/scripts, perform dry-run checks, or troubleshoot pipeline startup and scheduler submission errors.","version":1,"lift":{"pass_rate_delta_pts":40.91,"pass_rate_pct":72.7,"total_cases":22,"passed_cases":16,"tokens_delta_pct":38.9,"turns_delta_pct":0,"verdict":"mixed","benchmark_model":"gemini-3.6-flash","grading_method":"judged","completed_at":"2026-08-10T01:30:08.058530+00:00"},"skill_score":0.7273,"benchmark_models":[{"model":"gemini-3.6-flash","headline":true,"delta_pts":40.91,"with_pass_pct":72.7,"without_pass_pct":31.8,"tokens_delta_pct":38.9,"turns_delta_pct":0,"total_cases":22,"cases_aggregated":17,"verdict":"mixed","never_hurt":false,"completed_at":"2026-08-10T01:30:08.058530+00:00","run_id":"a429c0c2-18c1-4bf4-b71d-66f07185aadd","version_number":1,"is_latest_version":true,"gate":null}],"trust":{"skill_safety":"passed","safety_status":"clean","intent_verdict":"safe","content_status":"clean","indexable":true},"license":"MIT","install_count":0,"manifest_hash":"744dde2263cb413dd81bba903e56a4532551c4fd34083bc558b86ad8807e32e2","raw_url":"https://app.decimal.ai/s/k-dense-ai-pacsomatic/SKILL.md","scorecard_url":"https://app.decimal.ai/skills/k-dense-ai-pacsomatic"}