{"slug":"lingxling-pacsomatic","source_name":"lingxling/pacsomatic","name":"Lingxling/Pacsomatic","description":"Operator toolkit for nf-core/pacsomatic matched tumor-normal workflows from BAM inputs. Use this skill when the user needs to validate run inputs, generate pacsomatic-compliant samplesheets, prepare reproducible Nextflow launch artifacts, run locally or submit to schedulers (LSF/Slurm/PBS/SGE), and triage execution failures. Triggers on requests to run pacsomatic, prepare launch commands/scripts, perform dry-run checks, or troubleshoot pipeline startup and scheduler submission errors.","version":1,"lift":{"pass_rate_delta_pts":22.73,"pass_rate_pct":36.4,"total_cases":22,"passed_cases":8,"tokens_delta_pct":28.2,"turns_delta_pct":0,"verdict":"mixed","benchmark_model":"gemini-3.6-flash","grading_method":"judged","completed_at":"2026-08-29T02:25:56.815376+00:00"},"skill_score":0.3636,"benchmark_models":[{"model":"gemini-3.6-flash","headline":true,"delta_pts":22.73,"with_pass_pct":36.4,"without_pass_pct":13.6,"tokens_delta_pct":28.2,"turns_delta_pct":0,"total_cases":22,"cases_aggregated":10,"verdict":"mixed","never_hurt":false,"completed_at":"2026-08-29T02:25:56.815376+00:00","run_id":"301e6446-ff14-4e0f-86ba-85e3480c5206","version_number":1,"is_latest_version":true,"gate":null}],"trust":{"skill_safety":"passed","safety_status":"clean","intent_verdict":"safe","content_status":"clean","indexable":true},"license":"MIT","install_count":0,"manifest_hash":"733dacd1d294a0f654aa5b4b5f1ad5a8e27f20e54d373721bad8c2921b2094ab","raw_url":"https://app.decimal.ai/s/lingxling-pacsomatic/SKILL.md","scorecard_url":"https://app.decimal.ai/skills/lingxling-pacsomatic"}