{"slug":"mims-harvard-tooluniverse-epigenomics","source_name":"mims-harvard/tooluniverse-epigenomics","name":"Mims Harvard/Tooluniverse Epigenomics","description":"Genomics and epigenomics analysis: DNA methylation (CpG, 5mC, 5hmC, bisulfite, RRBS), m6A RNA modification (MeRIP-seq), ChIP-seq peaks, ATAC-seq accessibility, histone modifications, chromatin state, multi-omics integration. Combines pandas/scipy/pysam computation with ToolUniverse annotation tools. Use for genome-wide epigenomic statistics, methylation analysis, and chromatin-genome integration.","version":1,"lift":{"pass_rate_delta_pts":31.82,"pass_rate_pct":59.1,"total_cases":22,"passed_cases":13,"tokens_delta_pct":126.9,"turns_delta_pct":0,"verdict":"mixed","benchmark_model":"gemini-3.6-flash","grading_method":"judged","completed_at":"2026-08-06T14:41:15.783946+00:00"},"skill_score":0.5909,"benchmark_models":[{"model":"gemini-3.6-flash","headline":true,"delta_pts":31.82,"with_pass_pct":59.1,"without_pass_pct":27.3,"tokens_delta_pct":126.9,"turns_delta_pct":0,"total_cases":22,"cases_aggregated":18,"verdict":"mixed","never_hurt":false,"completed_at":"2026-08-06T14:41:15.783946+00:00","run_id":"3a3133a3-0926-4ef1-ad09-e6cb18e06184","version_number":1,"is_latest_version":true,"gate":null}],"trust":{"skill_safety":"passed","safety_status":"clean","intent_verdict":"safe","content_status":"clean","indexable":true},"license":"Apache-2.0","install_count":0,"manifest_hash":"2a07b9fa397eb8ecf93474c18589de86fc6b1bfc6f5265e1af94772e33507f91","raw_url":"https://app.decimal.ai/s/mims-harvard-tooluniverse-epigenomics/SKILL.md","scorecard_url":"https://app.decimal.ai/skills/mims-harvard-tooluniverse-epigenomics"}