{"slug":"mims-harvard-tooluniverse-microbial-genome-characterization","source_name":"mims-harvard/tooluniverse-microbial-genome-characterization","name":"Mims Harvard/Tooluniverse Microbial Genome Characterization","description":"Genome-ASSEMBLY discovery, QC, and replicon mapping for any organism (bacteria, archaea, fungi, and beyond) using NCBI Datasets. Resolves an organism name or taxid to assemblies, picks the reference/representative or best-quality assembly, pulls assembly QC metrics (total length, contig/scaffold N50, contig count, GC%, assembly level, RefSeq category), enumerates chromosomes and plasmids via per-replicon sequence reports, and compares candidate assemblies on quality. Use for \"what genomes are av","version":1,"lift":{"pass_rate_delta_pts":null,"pass_rate_pct":27.3,"total_cases":22,"passed_cases":6,"tokens_delta_pct":114,"turns_delta_pct":0,"verdict":"mixed","benchmark_model":"gemini-3.6-flash","grading_method":"judged","completed_at":"2026-08-06T15:53:42.013735+00:00"},"skill_score":null,"benchmark_models":[{"model":"gemini-3.6-flash","headline":false,"delta_pts":null,"with_pass_pct":null,"without_pass_pct":null,"tokens_delta_pct":114,"turns_delta_pct":0,"total_cases":22,"cases_aggregated":6,"verdict":"mixed","never_hurt":false,"completed_at":"2026-08-06T15:53:42.013735+00:00","run_id":"279042c5-efdc-4806-89cb-fe37cd17795c","version_number":1,"is_latest_version":true,"gate":"underpowered"}],"trust":{"skill_safety":"passed","safety_status":"clean","intent_verdict":"safe","content_status":"clean","indexable":true},"license":"Apache-2.0","install_count":0,"manifest_hash":"06b626cd3f44f343a30b9a50eeaf5ac64fb5e2b2c38dc9f2c1616877302ee77f","raw_url":"https://app.decimal.ai/s/mims-harvard-tooluniverse-microbial-genome-characterization/SKILL.md","scorecard_url":"https://app.decimal.ai/skills/mims-harvard-tooluniverse-microbial-genome-characterization"}