{"slug":"mims-harvard-tooluniverse-protein-structural-annotation-pdb","source_name":"mims-harvard/tooluniverse-protein-structural-annotation-pdb","name":"Mims Harvard/Tooluniverse Protein Structural Annotation Pdb","description":"Given a PDB structure, produce a per-residue annotation table: which residues sit at a binding interface (vs a partner chain), which line a ligand pocket, which are buried (core) vs solvent-exposed (surface), and optionally secondary structure. This is the structural track drawn under a DMS heatmap and the structural prior SAE feature drops are read against. Use when you need to anchor a variant-interpretation or DMS analysis to the protein's actual physical context.","version":1,"lift":{"pass_rate_delta_pts":45.45,"pass_rate_pct":77.3,"total_cases":22,"passed_cases":17,"tokens_delta_pct":26.4,"turns_delta_pct":0,"verdict":"mixed","benchmark_model":"gemini-3.6-flash","grading_method":"judged","completed_at":"2026-08-06T16:25:51.482933+00:00"},"skill_score":0.7727,"benchmark_models":[{"model":"gemini-3.6-flash","headline":true,"delta_pts":45.45,"with_pass_pct":77.3,"without_pass_pct":31.8,"tokens_delta_pct":26.4,"turns_delta_pct":0,"total_cases":22,"cases_aggregated":18,"verdict":"mixed","never_hurt":true,"completed_at":"2026-08-06T16:25:51.482933+00:00","run_id":"31489626-322c-4d41-84c5-c8e97dc150b1","version_number":1,"is_latest_version":true,"gate":null}],"trust":{"skill_safety":"passed","safety_status":"clean","intent_verdict":"safe","content_status":"clean","indexable":true},"license":"Apache-2.0","install_count":0,"manifest_hash":"2dc65862a1a5b5c33c1bde83f24c1ccc522870bda1158ec3886fe501c90cfaf4","raw_url":"https://app.decimal.ai/s/mims-harvard-tooluniverse-protein-structural-annotation-pdb/SKILL.md","scorecard_url":"https://app.decimal.ai/skills/mims-harvard-tooluniverse-protein-structural-annotation-pdb"}