{"slug":"mims-harvard-tooluniverse-regulatory-genomics","source_name":"mims-harvard/tooluniverse-regulatory-genomics","name":"Mims Harvard/Tooluniverse Regulatory Genomics","description":"Transcription factor binding, cis-regulatory elements (cCREs), chromatin accessibility, and regulatory annotation using JASPAR (motifs), ENCODE (cCREs, ChIP-seq), RegulomeDB (regulatory variant scoring), UCSC — plus sequence-based deep-learning prediction of regulatory activity and non-coding variant effects (AlphaGenome, Enformer, Borzoi, ChromBPNet, Evo 2). Use for regulatory element annotation, TF-binding-site prediction, regulatory-region functional impact assessment, and predicting how a no","version":1,"lift":{"pass_rate_delta_pts":4.55,"pass_rate_pct":50,"total_cases":22,"passed_cases":11,"tokens_delta_pct":316.3,"turns_delta_pct":0,"verdict":"mixed","benchmark_model":"gemini-3.6-flash","grading_method":"judged","completed_at":"2026-08-07T19:16:27.133618+00:00"},"skill_score":0.5,"benchmark_models":[{"model":"gemini-3.6-flash","headline":true,"delta_pts":4.55,"with_pass_pct":50,"without_pass_pct":45.5,"tokens_delta_pct":316.3,"turns_delta_pct":0,"total_cases":22,"cases_aggregated":14,"verdict":"mixed","never_hurt":false,"completed_at":"2026-08-07T19:16:27.133618+00:00","run_id":"e0ffe964-79f5-4b15-89b6-51cbf895a66a","version_number":1,"is_latest_version":true,"gate":null}],"trust":{"skill_safety":"passed","safety_status":"clean","intent_verdict":"safe","content_status":"clean","indexable":true},"license":"Apache-2.0","install_count":0,"manifest_hash":"c9567001347d83cdc7e28ce871626999537d700588d49c123bbacdba32c22102","raw_url":"https://app.decimal.ai/s/mims-harvard-tooluniverse-regulatory-genomics/SKILL.md","scorecard_url":"https://app.decimal.ai/skills/mims-harvard-tooluniverse-regulatory-genomics"}