{"slug":"mims-harvard-tooluniverse-variant-analysis","source_name":"mims-harvard/tooluniverse-variant-analysis","name":"Mims Harvard/Tooluniverse Variant Analysis","description":"VCF and variant analysis — parsing, annotation, classification (synonymous, missense, frameshift, stop_gained), VAF filtering, coding vs non-coding categorization, multi-condition variant comparison. Use for VCF parsing, variant fraction calculations (denominator = coding subset only, NOT all variants), and per-sample mutation profiling.","version":1,"lift":{"pass_rate_delta_pts":-9.09,"pass_rate_pct":63.6,"total_cases":22,"passed_cases":14,"tokens_delta_pct":396.6,"turns_delta_pct":0,"verdict":"mixed","benchmark_model":"gemini-3.6-flash","grading_method":"judged","completed_at":"2026-08-06T15:18:15.541169+00:00"},"skill_score":null,"benchmark_models":[{"model":"gemini-3.6-flash","headline":true,"delta_pts":-9.09,"with_pass_pct":63.6,"without_pass_pct":72.7,"tokens_delta_pct":396.6,"turns_delta_pct":0,"total_cases":22,"cases_aggregated":14,"verdict":"mixed","never_hurt":false,"completed_at":"2026-08-06T15:18:15.541169+00:00","run_id":"c778d36b-f0c5-442a-b513-cb40dedba45e","version_number":1,"is_latest_version":true,"gate":null}],"trust":{"skill_safety":"passed","safety_status":"clean","intent_verdict":"safe","content_status":"clean","indexable":true},"license":"Apache-2.0","install_count":0,"manifest_hash":"d15e2e790e949a693a3a98145388609b97abb65cc5e99a9a4e6c0734705d3a4c","raw_url":"https://app.decimal.ai/s/mims-harvard-tooluniverse-variant-analysis/SKILL.md","scorecard_url":"https://app.decimal.ai/skills/mims-harvard-tooluniverse-variant-analysis"}