{"slug":"xuzhougeng-scvi-tools","source_name":"xuzhougeng/scvi-tools","name":"Xuzhougeng/Scvi Tools","description":"Probabilistic single-cell RNA-seq with scvi-tools — scVI for a batch-corrected latent space, scANVI for semi-supervised label transfer, and Bayesian differential expression. Reach for this skill to integrate scRNA-seq batches, embed cells for clustering, transfer annotations from a reference onto a query, or score differentially expressed genes per cluster. For spatial deconvolution / mapping use the cell2location, DestVI, or Tangram methods instead.","version":1,"lift":{"pass_rate_delta_pts":39.13,"pass_rate_pct":100,"total_cases":23,"passed_cases":23,"tokens_delta_pct":72.6,"turns_delta_pct":0,"verdict":"pass","benchmark_model":"gemini-3.6-flash","grading_method":"judged","completed_at":"2026-08-14T03:11:12.833762+00:00"},"skill_score":1,"benchmark_models":[{"model":"gemini-3.6-flash","headline":true,"delta_pts":39.13,"with_pass_pct":100,"without_pass_pct":60.9,"tokens_delta_pct":72.6,"turns_delta_pct":0,"total_cases":23,"cases_aggregated":23,"verdict":"pass","never_hurt":true,"completed_at":"2026-08-14T03:11:12.833762+00:00","run_id":"dfa83204-eb10-4211-857d-731baa0984e2","version_number":1,"is_latest_version":true,"gate":null}],"trust":{"skill_safety":"passed","safety_status":"clean","intent_verdict":"safe","content_status":"clean","indexable":true},"license":"Apache-2.0","install_count":0,"manifest_hash":"dbc25dc74dab2cce393ab31a92c3dd5a54231fbbc82e14ea000fa70ee8271720","raw_url":"https://app.decimal.ai/s/xuzhougeng-scvi-tools/SKILL.md","scorecard_url":"https://app.decimal.ai/skills/xuzhougeng-scvi-tools"}