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Simulate SimBiology models — ODE, stochastic (SSA), scenarios, and sensitivity analysis.
Passed 20 of 22 test cases with the skill, and 11 of 22 without it.
and 15 more in the full report
10 fixed10 passed either way1 still failing1 broke
Tokens, turns and time describe resource use, not a dollar price.
One of 10 test cases the skill fixed. Same model, same prompt, with and without the skill.
I want to construct a multi-parameter scenario sweep using SimBiology.Scenarios where I combine 3 values of parameter ka and 2 values of ke. Show the MATLAB command to append the ke parameter values as a Cartesian combination to an existing scenarios object sc.
| Checked | Without skill | With skill |
|---|---|---|
| Places 'cartesian' strictly as the second argument to add(). | Missed | Passed |
| Avoids using the + operator on SimBiology.Scenarios objects. | Passed | Passed |
The instructions your model reads when the skill loads.
Run simulations of SimBiology models: deterministic ODE, stochastic SSA, scenario exploration, and sensitivity analysis.
matlab-build-simbiology-model)matlab-fit-simbiology-model)matlab-fit-simbiology-model)Run at the start of every session:
addpath(fullfile('<WORKSPACE_ROOT>', '.claude', 'skills', 'matlab-simulate-simbiology-model', 'scripts'));
Use ./ and .* (element-wise) in observable expressions when mixing
time-varying species with constant parameters. Plain / and * cause
size mismatches at simulation time.
When observables reference constant parameters (e.g., Drug ./ Vd),
add those parameters explicitly to StatesToLog:
test cases passed, vs 11 / 22 without
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