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Query AlphaFold protein structure predictions by UniProt accession
Passed 21 of 22 test cases with the skill, and 17 of 22 without it.
and 4 more in the full report
5 fixed16 passed either way0 still failing1 broke
Tokens, turns and time describe resource use, not a dollar price.
One of 5 test cases the skill fixed. Same model, same prompt, with and without the skill.
I need to retrieve protein structure metadata formatted according to the 3D-Beacons standard for accession P04637. What REST endpoint path provides this format?
| Checked | Without skill | With skill |
|---|---|---|
| The response specifies the endpoint path /api/uniprot/summary/P04637.json | Missed | Passed |
The instructions your model reads when the skill loads.
The AlphaFold DB, maintained by EMBL-EBI and DeepMind, provides open access to over 200 million protein structure predictions. The REST API enables programmatic lookup of predicted structures, confidence metrics (pLDDT, PAE), and downloadable structure files (PDB, mmCIF, BinaryCIF) keyed on UniProt accessions. Free, no authentication required.
None. All endpoints are publicly accessible without API keys or tokens.
Base URL: https://alphafold.ebi.ac.uk/api
Retrieves all AlphaFold models for a given UniProt accession or model ID.
curl "https://alphafold.ebi.ac.uk/api/prediction/P04637"
Response (first entry, abbreviated):
[
{
"entryId": "AF-P04637-F1",
"uniprotAccession": "P04637",
"uniprotId": "P53_HUMAN",
"uniprotDescription": "Cellular tumor antigen p53",
"gene": "TP53",
"organismScientificName": "Homo sapiens",
"taxId": 9606,
"globalMetricValue": 75.06,
"fractionPlddtVeryHigh": 0.527,
"fractionPlddtConfident": 0.071,
"fractionPlddtLow": 0.104,
"fractionPlddtVeryLow": 0.298,
"latestVersion": 6,
test cases passed, vs 17 / 22 without
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